Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | NCI_HIV-1 NEF: NEGATIVE EFFECTOR OF FAS AND TNF-ALPHA |
| Enrichment Score (ES) | -0.6712084 |
| Normalized Enrichment Score (NES) | -2.0098202 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.003919065 |
| FWER p-Value | 0.025 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | CYCS | 1422484_at 1445484_at | 57 | 6.950 | 0.0615 | No | ||
| 2 | CHUK | 1417091_at 1428210_s_at 1451383_a_at | 1214 | 2.804 | 0.0345 | No | ||
| 3 | CASP8 | 1424552_at | 3709 | 1.500 | -0.0655 | No | ||
| 4 | TNF | 1419607_at | 9533 | 0.499 | -0.3268 | No | ||
| 5 | NFKBIA | 1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at | 10443 | 0.375 | -0.3648 | No | ||
| 6 | CASP3 | 1426165_a_at 1430192_at 1449839_at | 10481 | 0.370 | -0.3631 | No | ||
| 7 | NFKB1 | 1427705_a_at 1442949_at | 11848 | 0.175 | -0.4239 | No | ||
| 8 | BID | 1417045_at 1447873_x_at 1448560_at | 14384 | -0.248 | -0.5373 | No | ||
| 9 | CRADD | 1427505_a_at 1443430_at | 14523 | -0.274 | -0.5411 | No | ||
| 10 | FASLG | 1418803_a_at 1449235_at | 14646 | -0.298 | -0.5440 | No | ||
| 11 | BCL2 | 1422938_at 1427818_at 1437122_at 1440770_at 1443837_x_at 1457687_at | 15444 | -0.468 | -0.5760 | No | ||
| 12 | MAPK8 | 1420931_at 1420932_at 1437045_at 1440856_at 1457936_at | 16570 | -0.764 | -0.6204 | No | ||
| 13 | TRADD | 1429117_at 1439910_a_at 1452622_a_at | 16801 | -0.841 | -0.6231 | No | ||
| 14 | RIPK1 | 1419508_at 1439273_at 1449485_at | 17018 | -0.908 | -0.6246 | No | ||
| 15 | BIRC3 | 1421392_a_at 1425223_at | 17639 | -1.121 | -0.6426 | No | ||
| 16 | DAXX | 1419026_at | 17755 | -1.177 | -0.6370 | No | ||
| 17 | CASP9 | 1426125_a_at 1437537_at 1457816_at | 17786 | -1.190 | -0.6274 | No | ||
| 18 | BAG4 | 1418707_at 1439024_at 1449186_at | 18489 | -1.510 | -0.6455 | No | ||
| 19 | FADD | 1416888_at 1446499_at | 18889 | -1.709 | -0.6480 | No | ||
| 20 | CASP2 | 1448165_at | 19399 | -2.069 | -0.6521 | Yes | ||
| 21 | CD247 | 1420716_at 1426079_at 1426396_at 1428059_at 1428060_at 1438392_at 1452539_a_at | 19435 | -2.093 | -0.6344 | Yes | ||
| 22 | DFFB | 1421229_at 1437051_at | 19782 | -2.361 | -0.6285 | Yes | ||
| 23 | MAP3K14 | 1422999_at 1434364_at | 20053 | -2.632 | -0.6165 | Yes | ||
| 24 | APAF1 | 1450223_at | 20613 | -3.326 | -0.6114 | Yes | ||
| 25 | FAS | 1460251_at | 20729 | -3.489 | -0.5845 | Yes | ||
| 26 | RELA | 1419536_a_at | 20962 | -3.850 | -0.5596 | Yes | ||
| 27 | MAP2K7 | 1421416_at 1425393_a_at 1425512_at 1425513_at 1440442_at 1451736_a_at 1457182_at | 20978 | -3.880 | -0.5245 | Yes | ||
| 28 | TRAF2 | 1451233_at | 21088 | -4.116 | -0.4916 | Yes | ||
| 29 | TRAF1 | 1423602_at 1445452_at | 21192 | -4.381 | -0.4559 | Yes | ||
| 30 | CFLAR | 1424996_at 1425686_at 1425687_at 1439600_at 1449317_at | 21824 | -8.576 | -0.4057 | Yes | ||
| 31 | TNFRSF1A | 1417291_at | 21853 | -9.228 | -0.3219 | Yes | ||
| 32 | CASP7 | 1426062_a_at 1448659_at | 21890 | -11.018 | -0.2220 | Yes | ||
| 33 | DFFA | 1450885_at 1457564_at | 21920 | -12.111 | -0.1117 | Yes | ||
| 34 | CASP6 | 1415995_at 1458715_at | 21923 | -12.179 | 0.0005 | Yes |
